PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G285100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 345aa    MW: 38399.5 Da    PI: 4.7339
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G285100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.83e-112693091055
                        HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        r+RR+riN+++  L+ l+P+      +K++ +++Le+AveY+k Lq
  Aqcoe6G285100.1.p 269 RKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 309
                        9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.402259308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-14259324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-13264323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-12265314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.32E-13268313No hitNo description
PfamPF000101.2E-8269309IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MESGGILFEG EWNSFNGMFT EEADFMKTLL GNCSFQSQHD GGLSLDNTST FWPSLEFTTM  60
EGGNEGSNFC SETVNTDTFH LLQETDYSGS SFNFPSMGND HYYLNESNSS MSMDYCMVLE  120
HNTGLPTTTC PDNHMEEAVC KNEEINTAHL RESGDILLDQ SLIPDQKLQQ KRKYEMPEPD  180
TKDVQGNKKN AQTKKKQKFI SYSKGEEESH CGFNGLSCSS YSSEGESNGS QELNGGGTSS  240
SKKSAALNLN GKARASRGSA TDPQSLYARK RRERINERLK ILQNLVPNGT KVDISTMLEE  300
AVEYVKFLQL QIKLLSSDDH WMYSPIAYNG MNIGLDLKMS PHKD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011001917.15e-97PREDICTED: transcription factor bHLH84-like isoform X1
TrEMBLB9HMZ02e-95B9HMZ0_POPTR; Basic helix-loop-helix family protein
STRINGPOPTR_0009s09210.14e-95(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-55bHLH family protein